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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076730Peroxisomal biogenesis factor 11 alpha. (246 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
   
 0.952
pex11g
Peroxisomal biogenesis factor 11 gamma.
    
0.941
pex11b
Peroxisomal biogenesis factor 11 beta.
  
  
 
0.903
pex14
Peroxisomal biogenesis factor 14.
    
 0.890
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.865
LOC101079883
Peroxisomal biogenesis factor 13.
   
 0.844
PEX13
Peroxisomal membrane protein PEX13-like.
   
 0.844
pex3
Peroxisomal biogenesis factor 3.
   
 0.838
fam185a
Family with sequence similarity 185 member A.
    
 0.798
pex16
Peroxisomal membrane protein PEX16.
   
 
 0.786
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.