STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076730Peroxisomal biogenesis factor 11 alpha. (246 aa)    
Predicted Functional Partners:
pex11g
Peroxisomal biogenesis factor 11 gamma.
    
0.955
pex19
Peroxisomal biogenesis factor 19.
   
 0.945
pex14
Peroxisomal biogenesis factor 14.
    
 0.925
pex3
Peroxisomal biogenesis factor 3.
   
 0.921
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.915
pex11b
Peroxisomal biogenesis factor 11 beta.
  
  
 
0.903
LOC101079883
Peroxisomal biogenesis factor 13.
   
 0.878
PEX13
Peroxisomal membrane protein PEX13-like.
   
 0.878
fam185a
Family with sequence similarity 185 member A.
    
 0.834
pex10
Peroxisomal biogenesis factor 10.
    
 
 0.830
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.