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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppm1dProtein phosphatase, Mg2+/Mn2+ dependent, 1Da. (554 aa)    
Predicted Functional Partners:
LOC101061288
Protein phosphatase, Mg2+/Mn2+ dependent, 1Db.
  
  
 
0.903
kiaa0753
Si:dkey-243i1.1.
      
 0.699
dph1
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.
      
 0.657
LOC101067966
Solute carrier family 13 member 5a.
      
 0.650
LOC101068194
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.650
LOC101075981
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
   
 
 0.634
cbfb
Core-binding factor subunit beta.
     
 0.597
chek2
Checkpoint kinase 2.
    
 
 0.589
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.518
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.518
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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