Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075548Uncharacterized protein. (336 aa)    
Predicted Functional Partners:
figla
BHLH domain-containing protein.
   
 0.745
ldb2
LIM domain binding 2a.
    
 0.617
LOC101073193
LIM domain binding 1a.
    
 0.617
LOC101073193-2
LIM domain-binding protein 1.
    
 0.617
ldb1
LIM domain binding 1a.
    
 0.617
ENSTRUP00000055829
Uncharacterized protein.
    
 
 0.569
TP53I3
Tumor protein p53 inducible protein 3.
    
 
 0.550
ccm2
CCM2 scaffold protein.
    
 0.541
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.529
dlx1
Distal-less homeobox 1a.
   
 
 0.522
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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