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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpb2Carboxypeptidase B2 (plasma). (429 aa)    
Predicted Functional Partners:
alg11
ALG11 alpha-1,2-mannosyltransferase.
   
  
 0.655
rpl31
Ribosomal protein L31.
      
 0.651
chst10
Carbohydrate sulfotransferase.
      
 0.637
usp40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
      
 0.632
LOC101077181
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1.
      
 0.628
c8a
Complement component 8, alpha polypeptide.
   
  
 0.601
hnf1a
HNF1 homeobox a.
   
  
 0.538
f10
Uncharacterized protein.
   
 
 0.533
LOC445940
Coagulation factor VIIi.
   
 
 0.533
LOC446072
Coagulation factor VII.
   
 
 0.528
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.