Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
armc9Armadillo repeat containing 9. (801 aa)    
Predicted Functional Partners:
togaram1
Uncharacterized protein.
    
 
 0.838
H2TWS9_TAKRU
Uncharacterized protein.
      
 0.724
ENSTRUP00000048905
Uncharacterized protein.
      
 0.719
ttc25
Tetratricopeptide repeat domain 25.
      
 0.679
dph5
Diphthamide biosynthesis 5.
      
 0.649
LOC101079296
LisH domain-containing protein.
     
 0.646
ttll11
Tubulin tyrosine ligase-like family, member 11.
      
 0.639
ckap5
Cytoskeleton associated protein 5.
      
 0.636
disp1
Dispatched homolog 1 (Drosophila).
   
  
 0.623
ENSTRUP00000057217
C2 domain-containing protein.
      
 0.586
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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