Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101076132LRAT domain containing 2. (269 aa)    
Predicted Functional Partners:
urod
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
   0.806
vwa5b2
VIT domain-containing protein.
      
 0.568
ecpas
Ecm29 proteasome adaptor and scaffold.
      
 0.520
lrwd1
Leucine-rich repeats and WD repeat domain containing 1.
      
 0.519
endov
Endonuclease V.
    
   0.505
vwa8
Von Willebrand factor A domain containing 8.
      
 0.477
trmt61b
tRNA methyltransferase 61B.
      
 0.476
ticrr
Treslin_N domain-containing protein.
      
 0.459
srp54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
      
 0.443
styx
Serine/threonine/tyrosine interacting protein.
      
 0.434
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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