STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hnrnpuHeterogeneous nuclear ribonucleoprotein Ub. (816 aa)    
Predicted Functional Partners:
LOC101076991
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.990
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.982
hnrnpc
RRM domain-containing protein.
   
 0.981
LOC101077619
Uncharacterized protein.
   
 0.972
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.968
rbmx
RNA binding motif protein X-linked.
   
 0.964
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.907
polr2a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.872
ewsr1
EWS RNA-binding protein 1b.
   
 0.846
LOC101066421
Heterogeneous nuclear ribonucleoprotein D.
   
 0.845
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (20%) [HD]