Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cdca8Cell division cycle associated 8. (257 aa)    
Predicted Functional Partners:
incenp
Uncharacterized protein.
   
 0.999
LOC101062741
Baculoviral IAP repeat containing 5a.
   
 0.999
LOC101064682
Baculoviral IAP repeat containing 5b.
   
 0.993
atp5f1a
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.992
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 0.991
atp5pd
ATP synthase peripheral stalk subunit d.
   
 0.991
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.991
atp5f1c
ATP synthase subunit gamma.
  
 0.989
ttk
Ttk protein kinase.
   
 
 0.986
atp5f1d
ATP synthase F1 subunit delta.
  
 0.986
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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