STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077674Selenoprotein J. (345 aa)    
Predicted Functional Partners:
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.810
taf9
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.807
LOC101066969
F-box-like/WD repeat-containing protein TBL1XR1.
   
 0.791
TBL1XR1
Uncharacterized protein.
   
 0.791
LOC101062383
Transducin beta like 1 X-linked.
   
 0.791
Sgf29
SAGA-associated factor 29.
    
 0.786
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.783
sin3a
SIN3 transcription regulator family member Aa.
   
 0.757
LOC101075468
SIN3 transcription regulator family member Ab.
   
 0.757
sin3b
SIN3 transcription regulator family member B.
   
 0.757
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.