STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077494Zgc:154093. (320 aa)    
Predicted Functional Partners:
LOC105416413
CDC42 effector protein (Rho GTPase binding) 1b.
     
 0.519
LOC101073130
CDC42 effector protein (Rho GTPase binding) 4a.
     
 0.519
LOC101064527
CDC42 effector protein (Rho GTPase binding) 4b.
     
 0.519
cdc42ep5
CDC42 effector protein (Rho GTPase binding) 5.
     
 0.519
cdc42se1
CDC42 small effector 1.
      
 0.502
anapc15
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
     
  0.483
LOC101075068
Si:ch211-150o23.3.
  
     0.481
gfod2
Glucose-fructose oxidoreductase domain containing 2.
     
  0.412
LOC101072667
Glucose-fructose oxidoreductase domain containing 1.
     
  0.412
H2V6T8_TAKRU
Ig-like domain-containing protein.
  
     0.400
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.