Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RprmReprimo, TP53 dependent G2 arrest mediator candidate b. (98 aa)    
Predicted Functional Partners:
LOC101075364
Reprimo-like.
  
  
 
0.903
LOC101079484
Neuropeptides B/W receptor 2a; Belongs to the G-protein coupled receptor 1 family.
      
 0.652
tal2
T-cell acute lymphocytic leukemia 2.
      
 0.601
prpf40a
PRP40 pre-mRNA processing factor 40 homolog A.
      
 0.518
arl6ip6
Uncharacterized protein.
      
 0.502
npb
Neuropeptide B.
      
 0.501
LOC101073337
Preproneuropeptide B.
      
 0.501
LOC101064535
Uncharacterized protein.
      
 0.501
emp2
Epithelial membrane protein 2.
      
 0.452
klhl38
Kelch-like family member 38b.
      
 0.445
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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