Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101065207Aryl hydrocarbon receptor nuclear translocator-like 2. (640 aa)    
Predicted Functional Partners:
sirt1
Sirtuin 1.
    
 0.891
CLOCK
Clock circadian regulator a.
   
0.863
LOC101065307
Neuronal PAS domain protein 2.
   
0.862
LOC101078879
Clock circadian regulator b.
   
 0.837
ENSTRUP00000077772
Cryptochrome circadian regulator 2.
   
 0.821
LOC115248360
Cryptochrome circadian regulator 2.
   
 0.819
LOC101072059
Cryptochrome circadian regulator 1a.
   
 0.811
LOC101077564
Cryptochrome DASH.
   
 0.810
csnk1d
Casein kinase 1, delta b; Belongs to the protein kinase superfamily.
    
 0.808
rora
RAR-related orphan receptor A, paralog a.
    
 0.797
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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