Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062570Ig-like domain-containing protein. (504 aa)    
Predicted Functional Partners:
LOC101067076
Hexosyltransferase.
     
 0.736
LOC101079525
Teashirt zinc finger homeobox 1.
      
 0.710
tmem131
Transmembrane protein 131.
      
 0.626
gmppb
GDP-mannose pyrophosphorylase B.
   
  
 0.623
LOC101079770
BTB domain-containing protein; Belongs to the potassium channel family.
    
 
 0.570
LOC101068997
Potassium voltage-gated channel, Shab-related subfamily, member 1; Belongs to the potassium channel family.
    
 
 0.570
LOC101066739
Hexosyltransferase.
     
 0.553
LOC101066431
Potassium voltage-gated channel subfamily B member 2; Belongs to the potassium channel family.
    
 
 0.545
H2TI60_TAKRU
Uncharacterized protein.
    
 0.532
CD109
CD109 antigen-like.
    
 0.532
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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