Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPFIBP2PPFIA binding protein 2. (969 aa)    
Predicted Functional Partners:
tm7sf3
Transmembrane 7 superfamily member 3.
      
 0.504
edrf1
Erythroid differentiation regulatory factor 1.
      
 0.470
PPFIA3
Uncharacterized protein.
   
 0.469
H2UX54_TAKRU
PTPRF interacting protein alpha 2.
   
 0.469
ppfia1
PTPRF interacting protein alpha 1.
   
 0.469
LOC101066647
PTPRF interacting protein alpha 3.
   
 0.469
LOC101066647-2
Liprin-alpha-3-like.
   
 0.469
H2RNZ3_TAKRU
PTPRF interacting protein alpha 4.
   
 0.469
ENSTRUP00000008647
Receptor-type tyrosine-protein phosphatase S-like isoform X1.
     
 0.453
LOC101067188
Protein tyrosine phosphatase receptor type Sa.
     
 0.453
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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