Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ythdf3YTH N(6)-methyladenosine RNA binding protein 3. (603 aa)    
Predicted Functional Partners:
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
  
 
 
 0.918
alkbh5
AlkB homolog 5, RNA demethylase.
      
 0.887
wtap
WT1 associated protein.
  
  
 0.809
LOC101079882
YTH N(6)-methyladenosine RNA binding protein 1.
   
 
 0.767
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
   
 
 0.767
lyve1
Eukaryotic translation initiation factor 4, gamma 2a.
   
 
 0.748
fto
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.742
zfc3h1
zf-C3H1 domain-containing protein.
    
 
 0.736
Zc3h13
Uncharacterized protein.
    
 
 0.735
rbm15
RNA binding motif protein 15.
      
 0.719
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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