Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adm3Adrenomedullin-3. (159 aa)    
Predicted Functional Partners:
adm4
Adrenomedullin-4.
     
 0.970
adm5
Adrenomedullin-5.
     
 0.968
adm
Adrenomedullin-1.
  
  
 0.966
calcrl
Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.
     
 0.917
calcr
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
     
 0.917
RAMP3
Receptor activity modifying protein 3.
     
 0.914
adm2
Adrenomedullin-2.
  
  
 
0.909
LOC101075671
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
     
 0.886
LOC101075726
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
     
 0.886
ramp2
Receptor (G protein-coupled) activity modifying protein 2.
     
 0.885
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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