STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arxAristaless related homeobox a. (497 aa)    
Predicted Functional Partners:
ALX3
Uncharacterized protein.
   
   0.905
LOC101075487
Orthopedia homeobox b.
   
  
 0.845
OTP
Orthopedia homeobox.
   
  
 0.845
uncx
UNC homeobox.
   
    0.740
LOC101077202
Unc4.1 homeobox (C. elegans).
   
    0.740
ENSTRUP00000049163
BTB domain-containing protein.
   
  0.628
zic2
Zic family member 2 (odd-paired homolog, Drosophila), a.
   
 0.626
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
    
   0.624
insm1
Insulinoma-associated 1a.
      
 0.587
LOC101067266
T cell leukemia homeobox 2.
    
  0.584
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.