Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POC1APOC1 centriolar protein A. (504 aa)    
Predicted Functional Partners:
LOC101074738
Retinoblastoma binding protein 5.
   
 0.836
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.833
LOC101061441
CXXC finger protein 1b.
    
 0.803
LOC101070909
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
   
 0.778
LOC101069329
KAT8 regulatory NSL complex subunit 3.
    
 0.752
LOC101071878
SET domain containing 1A, histone lysine methyltransferase.
   
 0.728
ENSTRUP00000082248
Histone-lysine N-methyltransferase SETD1B-A-like isoform X1.
   
 0.728
kat14
Lysine acetyltransferase 14.
    
  0.710
LOC101072840
Si:dkey-208k4.2.
    
 0.710
yeats2
YEATS domain containing 2.
    
 0.695
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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