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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101073318Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b. (577 aa)    
Predicted Functional Partners:
sec61g
SEC61 translocon gamma subunit.
   
 
 0.641
Tln1
Talin 1.
    
 0.621
tlnrd1
Talin rod domain containing 1.
    
 0.621
tlnrd1-2
Talin rod domain-containing protein 1-like.
    
 0.621
tln2
Talin 2b.
    
 0.621
gpsm2
Uncharacterized protein.
    
 
 0.614
LOC101068644
TPR_REGION domain-containing protein.
    
 
 0.614
LOC101069738
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
   
 0.492
pin1
Peptidyl-prolyl cis-trans isomerase.
    
 0.468
LOC101070216
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 0.466
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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