Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101079203Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
tsc2
TSC complex subunit 2.
    
 0.983
LOC101064948
TBC1 domain family, member 7.
     
 0.913
LOC101070860
TSC complex subunit 1b.
   
 
 0.911
ddit4
DNA-damage-inducible transcript 4.
  
  
 
0.904
smad6
Mothers against decapentaplegic homolog.
      
 0.562
bambi
BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a.
      
 0.545
ccn1
Cellular communication network factor 1.
      
 0.542
ccl20
C-C motif chemokine ligand 20.
      
 0.541
LOC101070983
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide; Belongs to the 14-3-3 family.
   
  0.457
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b; Belongs to the 14-3-3 family.
   
  0.457
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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