Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bco1Beta-carotene oxygenase 1, like. (588 aa)    
Predicted Functional Partners:
dhrs3
Dehydrogenase/reductase (SDR family) member 3b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.935
aox1
Aldehyde oxidase 6.
   
 
 0.921
raldh3
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.911
aldh1a2
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.911
sdr16c5
Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.909
LOC101080063
Zgc:77938.
   
 
 0.903
LOC101064925
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.903
LOC115247913
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.903
LOC101078894
Alcohol dehydrogenase 8b.
   
 
 0.903
LOC101078539
Beta-carotene oxygenase 1.
  
  
 
0.902
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (42%) [HD]