Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrps22Mitochondrial ribosomal protein S22. (369 aa)    
Predicted Functional Partners:
dap3
Death associated protein 3.
   
 0.999
mrps35
Mitochondrial ribosomal protein S35.
   
 0.999
mrps31
Mitochondrial ribosomal protein S31.
   
 0.999
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 0.999
mrps16
Mitochondrial ribosomal protein S16.
   
 0.999
mrps7
Mitochondrial ribosomal protein S7.
   
 0.998
mrps25
Mitochondrial ribosomal protein S25.
   
 0.998
Mrps28
Mitochondrial ribosomal protein S28.
   
  0.998
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.998
Mrps14
28S ribosomal protein S14, mitochondrial.
   
 0.998
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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