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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps22Mitochondrial ribosomal protein S22. (369 aa)    
Predicted Functional Partners:
dap3
Death associated protein 3.
   
 0.997
mrps35
Mitochondrial ribosomal protein S35.
   
 0.996
mrps16
Mitochondrial ribosomal protein S16.
   
 0.996
ptcd3
Pentatricopeptide repeat domain 3.
   
 0.995
LOC101079165
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
   
 0.995
mrps31
Mitochondrial ribosomal protein S31.
   
 0.995
mrps10
Mitochondrial ribosomal protein S10.
   
 0.994
Mrps28
Mitochondrial ribosomal protein S28.
   
  0.994
mrps25
Mitochondrial ribosomal protein S25.
   
 0.993
mrps18b
Mitochondrial ribosomal protein S18B.
   
 0.993
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.