Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101064111Epithelial splicing regulatory protein 2. (740 aa)    
Predicted Functional Partners:
LOC101072423
RNA binding protein, mRNA processing factor.
    
 
 0.811
rbpms2
RNA binding protein, mRNA processing factor 2b.
    
 0.773
ptbp1
Polypyrimidine tract binding protein 1a.
     
 0.660
LOC101069523
40S ribosomal protein S20.
      
 0.574
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
     
 0.565
Srsf10
RRM domain-containing protein.
    
 0.564
srsf7
Serine and arginine rich splicing factor 7a.
      
 0.549
RPS20
Ribosomal protein S20.
      
 0.548
tert
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
      
 0.541
ets1
V-ets avian erythroblastosis virus E26 oncogene homolog 1.
      
 0.540
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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