STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chst11Carbohydrate sulfotransferase. (439 aa)    
Predicted Functional Partners:
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.908
CHST15
Carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15.
      
 0.828
cop1
COP1 E3 ubiquitin ligase.
      
 0.826
LOC101062081
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.792
csgalnact2
Hexosyltransferase.
      
 0.761
LOC101079135
Hexosyltransferase.
      
 0.760
pigb
Mannosyltransferase.
   
  
 0.734
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
      
 0.724
dse
Dermatan sulfate epimerase.
      
 0.705
extl2
Exostosin-like glycosyltransferase 2.
      
 0.702
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.