Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL10Oxysterol-binding protein; Belongs to the OSBP family. (758 aa)    
Predicted Functional Partners:
osbpl9
Oxysterol-binding protein; Belongs to the OSBP family.
   
   0.731
LOC101069898
Protein tyrosine phosphatase receptor type Ub.
   
  
 0.623
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
    
 
 0.594
pgam5
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
    
   0.589
LOC101078863
VAMP (vesicle-associated membrane protein)-associated protein B and C.
   
 
 0.568
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
   
 
 0.568
LOC101075309
Nipsnap homolog 2.
   
  0.552
LOC105418057
Nipsnap homolog 1 (C. elegans).
   
  0.552
NIPSNAP2
NIPSNAP domain-containing protein.
   
  0.552
lars2
Leucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.548
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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