Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101066140BAALC binder of MAP3K1 and KLF4 b. (217 aa)    
Predicted Functional Partners:
alkbh8
AlkB homolog 8, tRNA methyltransferase.
   
  
 0.654
aspg
Asparaginase homolog (S. cerevisiae).
      
 0.516
LOC101065923
Uncharacterized protein.
      
 0.495
polr3a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.491
znf236
Zinc finger protein 236.
    
 
 0.445
LOC101070067
Frizzled class receptor 3b; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.437
fzd6
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.437
fzd3
FZ domain-containing protein.
    
 0.437
cfap300
Cilia and flagella associated protein 300.
    
 
 0.426
naa10
N(alpha)-acetyltransferase 10, NatA catalytic subunit.
    
 
 0.423
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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