Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101066410Uncharacterized protein; Belongs to the potassium channel family. (454 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.794
nol10
Nucleolar protein 10.
      
 0.703
SLITRK1
SLIT and NTRK like family member 1.
   
 
 0.681
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
 0.663
LOC101062207
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
   
 0.663
KCNAB1
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 b.
   
 0.663
ENSTRUP00000084087
annotation not available
   
 0.663
LOC101066150
Voltage-gated potassium channel subunit beta-2.
   
 0.663
slc66a3
Solute carrier family 66 member 3.
      
 0.656
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.583
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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