Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101072116Regulatory factor X7b. (1474 aa)    
Predicted Functional Partners:
rfxap
Regulatory factor X-associated protein.
    
 
 0.647
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.615
rfxank
Regulatory factor X-associated ankyrin-containing protein.
    
 
 0.601
btaf1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.
    
   0.556
chek2
Checkpoint kinase 2.
   
 
 0.525
arl13b
Uncharacterized protein.
      
 0.427
pik3ip1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.427
ttc25
Tetratricopeptide repeat domain 25.
    
 
 0.421
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
    
 
 0.413
espl1
Extra spindle pole bodies like 1, separase.
    
   0.405
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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