STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nostrinNitric oxide synthase trafficking. (516 aa)    
Predicted Functional Partners:
mysm1
Histone H2A deubiquitinase MYSM1.
   
 0.789
nos1
Nitric oxide synthase; Produces nitric oxide (NO).
    
 0.779
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.672
LOC101077791
Uncharacterized protein.
    
 0.653
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.643
wasl
WASP like actin nucleation promoting factor a.
   
 0.642
LOC101069458
WASP like actin nucleation promoting factor b.
   
 0.642
LOC101071646
Uncharacterized protein.
   
 0.628
dab2
DAB adaptor protein 2.
    
   0.624
WDR1
WD repeat domain 1.
   
 0.619
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.