STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl38Mitochondrial ribosomal protein L38. (386 aa)    
Predicted Functional Partners:
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.924
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.923
dap3
Death associated protein 3.
   
 
 0.920
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.914
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.912
mrps10
Mitochondrial ribosomal protein S10.
   
 
 0.912
mrpl10
Mitochondrial ribosomal protein L10.
   
 
 0.911
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.904
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.904
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.895
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.