slc25a33 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

slc25a33

Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family. (314 aa)

Predicted Functional Partners:

pex19

0.659

pex12

0.565

pex16

0.555

LOC101075777

0.533

pex3

0.517

LOC101079883

0.498

PEX13

0.498

pxmp4

0.483

ENSTRUP00000060665

0.473

LOC101073714

0.473

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000060665	LOC101073714	ENSTRUP00000060665	ENSTRUP00000067804	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	ATP-binding cassette, sub-family D (ALD), member 2.	0.994
ENSTRUP00000060665	LOC101079883	ENSTRUP00000060665	ENSTRUP00000064055	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	Peroxisomal biogenesis factor 13.	0.748
ENSTRUP00000060665	PEX13	ENSTRUP00000060665	ENSTRUP00000085392	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	Peroxisomal membrane protein PEX13-like.	0.748
ENSTRUP00000060665	pex12	ENSTRUP00000060665	ENSTRUP00000065619	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.792
ENSTRUP00000060665	pex16	ENSTRUP00000060665	ENSTRUP00000021309	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	Peroxisomal membrane protein PEX16.	0.825
ENSTRUP00000060665	pex19	ENSTRUP00000060665	ENSTRUP00000074002	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	Peroxisomal biogenesis factor 19.	0.928
ENSTRUP00000060665	pex3	ENSTRUP00000060665	ENSTRUP00000040763	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	Peroxisomal biogenesis factor 3.	0.874
ENSTRUP00000060665	pxmp4	ENSTRUP00000060665	ENSTRUP00000047247	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.664
ENSTRUP00000060665	slc25a33	ENSTRUP00000060665	ENSTRUP00000020003	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.473
LOC101073714	ENSTRUP00000060665	ENSTRUP00000067804	ENSTRUP00000060665	ATP-binding cassette, sub-family D (ALD), member 2.	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	0.994
LOC101073714	LOC101079883	ENSTRUP00000067804	ENSTRUP00000064055	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal biogenesis factor 13.	0.761
LOC101073714	PEX13	ENSTRUP00000067804	ENSTRUP00000085392	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal membrane protein PEX13-like.	0.761
LOC101073714	pex12	ENSTRUP00000067804	ENSTRUP00000065619	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.758
LOC101073714	pex16	ENSTRUP00000067804	ENSTRUP00000021309	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal membrane protein PEX16.	0.743
LOC101073714	pex19	ENSTRUP00000067804	ENSTRUP00000074002	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal biogenesis factor 19.	0.931
LOC101073714	pex3	ENSTRUP00000067804	ENSTRUP00000040763	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal biogenesis factor 3.	0.807
LOC101073714	pxmp4	ENSTRUP00000067804	ENSTRUP00000047247	ATP-binding cassette, sub-family D (ALD), member 2.	Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.703
LOC101073714	slc25a33	ENSTRUP00000067804	ENSTRUP00000020003	ATP-binding cassette, sub-family D (ALD), member 2.	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.473
LOC101075777	slc25a33	ENSTRUP00000007857	ENSTRUP00000020003	Malate synthase-like.	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.533
LOC101079883	ENSTRUP00000060665	ENSTRUP00000064055	ENSTRUP00000060665	Peroxisomal biogenesis factor 13.	LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 3-like.	0.748

page 1 of 5

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About