STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc25a33Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family. (314 aa)    
Predicted Functional Partners:
cct3
T-complex protein 1 subunit gamma.
    
 
 0.631
edf1
Endothelial differentiation-related factor 1.
    
   0.573
pum1
Pumilio RNA-binding family member 1.
    
   0.570
pum2
Pumilio RNA-binding family member 2.
    
   0.570
pex19
Peroxisomal biogenesis factor 19.
    
 0.567
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.470
SLC25A28
Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.469
slc25a28
Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.469
tmem201
Transmembrane protein 201.
 
    
 0.462
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.443
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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