STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nenfNeudesin neurotrophic factor; Belongs to the cytochrome b5 family. (183 aa)    
Predicted Functional Partners:
LOC101069992
Cytochrome b5 type B; Belongs to the cytochrome b5 family.
   
  
 0.719
LOC101064531
Jade family PHD finger 1.
      
 0.679
larp1b
La ribonucleoprotein domain family, member 1B.
   
 
 0.670
camkk1
Calcium/calmodulin-dependent protein kinase kinase 1, alpha a.
   
  
 0.638
ankrd54
FAD-dependent oxidoreductase domain containing 2.
    
 
 0.565
fopnl
Fgfr1op N-terminal like.
   
    0.522
erp27
Uncharacterized protein.
    
 
 0.508
znhit2
Zinc finger, HIT-type containing 2.
      
 0.493
calml4
Calmodulin-like 4a.
      
 0.451
H2RYE3_TAKRU
EF-hand domain-containing protein.
      
 0.451
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.