STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hps1HPS1 biogenesis of lysosomal organelles complex 3 subunit 1. (680 aa)    
Predicted Functional Partners:
hps4
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.
    
 0.979
hpdl
4-hydroxyphenylpyruvate dioxygenase.
     
 0.706
hpd
4-hydroxyphenylpyruvate dioxygenase.
     
 0.706
hps3
Hermansky-Pudlak syndrome 3 protein isoform X1.
      
 0.584
gtf2h1
General transcription factor IIH, polypeptide 1.
      
 0.573
HPS6
HPS6 biogenesis of lysosomal organelles complex 2 subunit 3.
      
 0.552
LOC101072325
Zgc:162171.
     
 0.530
RAB38
RAB38, member RAS oncogene family.
     
 0.530
rab32
RAB32a, member RAS oncogene family.
     
 0.530
LOC101073692
RAB38b, member of RAS oncogene family.
     
 0.530
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.