STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105416191H15 domain-containing protein. (203 aa)    
Predicted Functional Partners:
ENSTRUP00000050752
Histone H2B; Belongs to the histone H2B family.
   
 0.698
LOC115253391
Histone H2B; Belongs to the histone H2B family.
   
 0.698
LOC101068558
Histone H2B; Belongs to the histone H2B family.
   
 0.698
LOC115248316
Histone H2B; Belongs to the histone H2B family.
   
 0.698
LOC115248316-2
Histone H2B 1/2-like.
   
 0.690
LOC115248316-3
Histone H2B 1/2-like.
   
 0.690
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.682
LOC101080230
Histone H2A; Belongs to the histone H2A family.
   
 
 0.682
actl6a
Actin-like 6A; Belongs to the actin family.
    
 
 0.656
LOC101068629
Histone H2A; Belongs to the histone H2A family.
   
 0.618
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.