STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aff4AF4/FMR2 family, member 4. (1159 aa)    
Predicted Functional Partners:
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 0.999
eaf1
ELL associated factor 1.
    
 0.998
eaf2
ELL associated factor 2.
    
 0.996
Ccnt2
Cyclin T2; Belongs to the cyclin family.
   
 0.994
LOC101079666
Cyclin T2b; Belongs to the cyclin family.
   
 0.994
mllt3
MLLT3 super elongation complex subunit.
    
 0.993
mllt1
MLLT1 super elongation complex subunit a.
    
 0.993
ell2
Elongation factor, RNA polymerase II, 2.
    
 0.993
ell
Elongation factor RNA polymerase II.
    
 0.990
LOC101080126
Si:ch211-13k12.2.
    
 0.987
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.