STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069587SplA/ryanodine receptor domain and SOCS box containing 1. (273 aa)    
Predicted Functional Partners:
cul5
Cullin 5a; Belongs to the cullin family.
    
 0.867
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.859
tmem201
Transmembrane protein 201.
   
  
 0.740
spsb3
SplA/ryanodine receptor domain and SOCS box containing 3a.
     
 0.727
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.705
rnf7
Ring finger protein 7.
    
 0.699
mycbp2
MYC binding protein 2.
    
 
 0.697
klhl17
Kelch-like family member 17.
     
 0.664
LOC101067734
Solute carrier family 25 member 36b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.662
LOC101075508
Solute carrier family 2 member 5; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.654
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.