Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mtfr1Mitochondrial fission regulator 1. (295 aa)    
Predicted Functional Partners:
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.659
LOC101061166
Somatotropin; Growth hormone plays an important role in growth control and is involved in the regulation of several anabolic processes. Implicated as an osmoregulatory substance important for seawater adaptation; Belongs to the somatotropin/prolactin family.
   
    0.601
LOC101070289
Somatolactin alpha.
   
    0.601
cpq
Peptidase_M28 domain-containing protein.
     
 0.546
dld
Dihydrolipoyl dehydrogenase.
   
    0.478
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
    0.452
memo1
Mediator of cell motility 1.
     
 0.450
LOC101068307
G-patch domain-containing protein.
    
 
 0.444
anln
Anillin, actin binding protein.
   
 
 0.439
LOC105418333
Anillin domain-containing protein.
   
 
 0.439
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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