Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101063506Receptor protein-tyrosine kinase. (1004 aa)    
Predicted Functional Partners:
LOC101062176
Forkhead box J2.
    
 0.763
H2RPX4_TAKRU
ER membrane protein complex subunit 6.
    
 
 0.755
efnb1
Ephrin-B1; Belongs to the ephrin family.
   
 0.740
ENSTRUP00000059190
Kell metallo-endopeptidase (Kell blood group).
    
 
 0.658
LOC115248663
Kell blood group glycoprotein-like isoform X1.
    
 
 0.658
golim4
Uncharacterized protein.
      
 0.646
LOC101072391
Si:dkey-246i14.3; Belongs to the ephrin family.
   
 0.624
efna1
Ephrin-A1b; Belongs to the ephrin family.
   
 0.601
LOC101077341
Ephrin-A1a; Belongs to the ephrin family.
   
 0.599
EFNA2
Ephrin A2; Belongs to the ephrin family.
   
 0.592
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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