Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101065430Si:ch211-245j22.3. (198 aa)    
Predicted Functional Partners:
LOC101070216
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.534
LOC101078308
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.534
ENSTRUP00000008077
Calmodulin 1b.
   
 0.528
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.528
calm2-2
Calmodulin 3.
   
 0.528
LOC101064505
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.528
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.464
LOC101066410
Uncharacterized protein; Belongs to the potassium channel family.
   
 0.446
H2VBM3_TAKRU
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
   
 0.446
LOC101070759
Discs, large homolog 3 (Drosophila); Belongs to the MAGUK family.
    
 0.430
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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