Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
pagr1PAXIP1 associated glutamate-rich protein 1. (273 aa)    
Predicted Functional Partners:
kdm6a
Lysine (K)-specific demethylase 6A, like.
    
 0.986
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.954
LOC105416732
Mediator of DNA damage checkpoint protein 1.
    
 0.953
paxip1
PAX interacting (with transcription-activation domain) protein 1.
    
 0.953
LOC101074738
Retinoblastoma binding protein 5.
    
 0.952
ENSTRUP00000062730
Nucleic_acid_bd domain-containing protein.
    
 0.946
wdr5
WD repeat domain 5.
    
 0.933
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.918
LOC101078029
Uncharacterized protein.
    
 0.914
LOC101065748
Lysine (K)-specific demethylase 6B, a.
    
 0.914
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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