spart protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

spart

Spartin b. (603 aa)

Predicted Functional Partners:

ist1

0.937

LOC101061475

0.885

LOC101070007

0.885

ENSTRUP00000055319

0.761

wwp2

0.744

ENSTRUP00000070181

0.744

LOC101068611

0.744

tor4a

0.725

nipa1

0.721

trim45

0.710

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000055319	spart	ENSTRUP00000055319	ENSTRUP00000020368	Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family.	Spartin b.	0.761
ENSTRUP00000070181	LOC101061475	ENSTRUP00000070181	ENSTRUP00000029093	annotation not available	E3 ubiquitin-protein ligase.	0.769
ENSTRUP00000070181	LOC101070007	ENSTRUP00000070181	ENSTRUP00000047199	annotation not available	E3 ubiquitin-protein ligase.	0.769
ENSTRUP00000070181	spart	ENSTRUP00000070181	ENSTRUP00000020368	annotation not available	Spartin b.	0.744
LOC101061475	ENSTRUP00000070181	ENSTRUP00000029093	ENSTRUP00000070181	E3 ubiquitin-protein ligase.	annotation not available	0.769
LOC101061475	LOC101068611	ENSTRUP00000029093	ENSTRUP00000081008	E3 ubiquitin-protein ligase.	WW domain containing E3 ubiquitin protein ligase 1.	0.769
LOC101061475	spart	ENSTRUP00000029093	ENSTRUP00000020368	E3 ubiquitin-protein ligase.	Spartin b.	0.885
LOC101061475	wwp2	ENSTRUP00000029093	ENSTRUP00000009257	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.769
LOC101068611	LOC101061475	ENSTRUP00000081008	ENSTRUP00000029093	WW domain containing E3 ubiquitin protein ligase 1.	E3 ubiquitin-protein ligase.	0.769
LOC101068611	LOC101070007	ENSTRUP00000081008	ENSTRUP00000047199	WW domain containing E3 ubiquitin protein ligase 1.	E3 ubiquitin-protein ligase.	0.769
LOC101068611	spart	ENSTRUP00000081008	ENSTRUP00000020368	WW domain containing E3 ubiquitin protein ligase 1.	Spartin b.	0.744
LOC101070007	ENSTRUP00000070181	ENSTRUP00000047199	ENSTRUP00000070181	E3 ubiquitin-protein ligase.	annotation not available	0.769
LOC101070007	LOC101068611	ENSTRUP00000047199	ENSTRUP00000081008	E3 ubiquitin-protein ligase.	WW domain containing E3 ubiquitin protein ligase 1.	0.769
LOC101070007	spart	ENSTRUP00000047199	ENSTRUP00000020368	E3 ubiquitin-protein ligase.	Spartin b.	0.885
LOC101070007	wwp2	ENSTRUP00000047199	ENSTRUP00000009257	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.769
ist1	spart	ENSTRUP00000058412	ENSTRUP00000020368	IST1 factor associated with ESCRT-III.	Spartin b.	0.937
nipa1	spart	ENSTRUP00000024268	ENSTRUP00000020368	NIPA magnesium transporter 1.	Spartin b.	0.721
spart	ENSTRUP00000055319	ENSTRUP00000020368	ENSTRUP00000055319	Spartin b.	Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family.	0.761
spart	ENSTRUP00000070181	ENSTRUP00000020368	ENSTRUP00000070181	Spartin b.	annotation not available	0.744
spart	LOC101061475	ENSTRUP00000020368	ENSTRUP00000029093	Spartin b.	E3 ubiquitin-protein ligase.	0.885