Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101077541TLC domain containing 3Bb. (302 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.664
ccdc189
Uncharacterized protein.
    
 
 0.597
ENSTRUP00000083273
Uncharacterized protein.
    
 
 0.597
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.568
ppp1r16b
Protein phosphatase 1, regulatory subunit 16B.
    
 
 0.529
mfsd12
Major facilitator superfamily domain containing 12a.
   
  
 0.525
ppp4c
Serine/threonine-protein phosphatase.
    
 
 0.518
sez6l2
Seizure related 6 homolog (mouse)-like 2.
   
 
 0.513
cln8
CLN8 transmembrane ER and ERGIC protein.
      
 0.498
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.477
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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