STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101070183Forkhead box A2. (415 aa)    
Predicted Functional Partners:
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
     
 0.636
sox17
SRY-box transcription factor 17.
    
 
 0.608
gata6
GATA binding protein 6.
    
 0.608
gata4
GATA binding protein 4.
    
 0.606
ENSTRUP00000077588
NRIP1_repr_2 domain-containing protein.
     
 0.604
nkx2-5
NK2 homeobox 5.
   
 
 0.602
pgr
Progesterone receptor.
    
 0.600
gata3
GATA binding protein 3.
    
 0.583
GATA2
GATA binding protein 2.
    
 0.583
LOC101076071
GATA binding protein 2a.
    
 0.583
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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