Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101076758Nuclear receptor subfamily 1, group D, member 4b. (572 aa)    
Predicted Functional Partners:
ncor2
Nuclear receptor corepressor 2.
    
 0.838
ncor1
Nuclear receptor corepressor 1.
    
 0.838
LOC101077674
Selenoprotein J.
    
 0.718
LOC101080225
Sphingosine-1-phosphate receptor 4; Belongs to the G-protein coupled receptor 1 family.
      
 0.705
HDAC3
Histone deacetylase 3.
    
 0.597
mmaa
Metabolism of cobalamin associated A.
      
 0.576
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.562
LOC101065207
Aryl hydrocarbon receptor nuclear translocator-like 2.
    
 0.562
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
    
 0.562
Tnpo3
Transportin 3.
      
 0.557
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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