STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071000Phosphoenolpyruvate carboxykinase 1 (soluble). (623 aa)    
Predicted Functional Partners:
PC
Pyruvate carboxylase.
   
 
 0.964
LOC101068874
Enolase 2.
     
 0.948
mdh1
Malate dehydrogenase.
  
 
 0.948
LOC101072315
Malate dehydrogenase.
  
 
 0.948
eno1
Enolase 1a, (alpha).
     
 0.948
LOC101077734
Enolase 1b, (alpha).
     
 0.948
ENO2
Enolase 2.
     
 0.948
eno3
Enolase_C domain-containing protein.
     
 0.948
cs
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.935
LOC446067
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.925
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.