STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsrc2Arginine/serine-rich coiled-coil 2. (339 aa)    
Predicted Functional Partners:
rbm25
RNA binding motif protein 25b.
   
  
 0.839
ythdc1
YTH domain-containing protein 1.
   
    0.587
scf
Uncharacterized protein.
    
 0.525
mier2
Mesoderm induction early response 1, family member 2.
      
 0.503
znf277
Zinc finger protein 277.
    
 
 0.501
arid4b
Translocase of outer mitochondrial membrane 20.
   
    0.499
arid4a
AT rich interactive domain 4A (RBP1-like).
   
    0.499
ENSTRUP00000064256
annotation not available
   
    0.499
Arid4b
Uncharacterized protein.
   
    0.499
il34
Uncharacterized protein.
   
 0.482
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.