Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC101077597Platelet endothelial aggregation receptor 1-like. (1000 aa)    
Predicted Functional Partners:
gulp1
GULP PTB domain containing engulfment adaptor 1a.
   
 
 0.807
sharpin
SHANK-associated RH domain interacting protein.
     
 0.722
LOC101070557
G-patch domain-containing protein.
      
 0.718
sarm1
Sterile alpha and TIR motif containing 1.
      
 0.710
LOC101075621
Extended synaptotagmin-like protein 1b.
      
 0.706
LOC101061098
Extended synaptotagmin-like protein 1a.
      
 0.706
speg
Striated muscle preferentially expressed protein kinase isoform X1.
      
 0.701
asb1
Ankyrin repeat and SOCS box containing 1.
    
 0.602
LOC105416279
SEFIR domain-containing protein.
      
 0.602
shc2
SHC (Src homology 2 domain containing) transforming protein 2.
      
 0.568
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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