STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2T7C9_TAKRUSi:dkey-148a17.6; Belongs to the G-protein coupled receptor 1 family. (349 aa)    
Predicted Functional Partners:
H2SX84_TAKRU
Leukotriene B4 receptor 2b.
     
0.905
LOC101070560
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 
0.900
ENSTRUP00000084846
Uncharacterized protein.
    
 0.607
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
      
 0.580
LOC446087
Cholinergic receptor, nicotinic, alpha 1 (muscle).
      
 0.580
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.560
grm5
Glutamate receptor, metabotropic 5b.
     
 0.527
LOC101071641
Integrin beta.
      
 0.519
syk
Tyrosine-protein kinase.
    
 0.506
rasl10a
RAS-like, family 10, member A.
    
 0.480
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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