STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps6ka6Ribosomal protein S6 kinase. (700 aa)    
Predicted Functional Partners:
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.965
LOC101066563
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.965
LOC101070860
TSC complex subunit 1b.
    
 0.917
LOC101064948
TBC1 domain family, member 7.
     
 0.915
atf4
Activating transcription factor 4a.
     
 0.907
LOC101071645
Ribosomal protein S6 kinase.
  
  
 
0.905
LOC101075957
Activating transcription factor 4b.
     
 0.905
LOC101070821
Ribosomal protein S6 kinase.
  
  
 
0.901
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
     
  0.900
pkmyt1
Protein kinase, membrane associated tyrosine/threonine 1.
     
 
0.900
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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