STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc25a46Solute carrier family 25 member 46; Belongs to the mitochondrial carrier (TC 2.A.29) family. (427 aa)    
Predicted Functional Partners:
LOC101074182
Membrane-associated ring finger (C3HC4) 5, like.
   
 
 0.641
March5
Membrane-associated ring finger (C3HC4) 5.
   
 
 0.641
slc25a48
Solute carrier family 25 member 48; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.582
SLC66A2
Solute carrier family 66 member 2.
    
   0.578
LOC101074049
Si:dkey-246g23.2.
    
   0.578
slc25a16
Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.568
LOC101068108
Receptor expression-enhancing protein.
   
  
 0.520
slc25a51
Solute carrier family 25 member 51b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.511
rab2a
RAB2A, member RAS oncogene family.
      
 0.502
opa3
Outer mitochondrial membrane lipid metabolism regulator OPA3.
      
 0.497
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.